dagBackground-class: Class 'dagBackground'.
In dagLogo: dagLogo: a Bioconductor package for visualizing conserved amino acid sequence pattern in groups based on probability theory
Description
An S4 class to represent a background composed of a formatted,
aligned peptides for dagLogo analysis.
Slots
backgroundA list of data frame, each of which represetns
one subset of the background set. Within each n-by-1 dataframe is a the
aligned peptides of same length.
numSubsamplesAn integer. That is the length of the background list
testTypeAn character. The type of statistic testing for dagLogo analysis of
differential usage of amino acids.
Author(s)
Jianhong Ou, Haibo Liu
dagLogo documentation built on Dec. 5, 2020, 2 a.m.
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Description
An S4 class to represent a background composed of a formatted, aligned peptides for dagLogo analysis.
Slots
backgroundA list of data frame, each of which represetns one subset of the background set. Within each n-by-1 dataframe is a the aligned peptides of same length.
numSubsamplesAn integer. That is the length of the
backgroundlisttestTypeAn character. The type of statistic testing for dagLogo analysis of differential usage of amino acids.
Author(s)
Jianhong Ou, Haibo Liu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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