guo: Guo at al. mouse embryonic stem cell qPCR data
In destiny: Creates diffusion maps
Description
Usage
Format
Details
Value
Author(s)
References
Description
Gene expression data of 48 genes and an annotation column $num_cells containing the cell stage at which the embryos were harvested.
Usage
1
2
Format
An ExpressionSet with 48 features, 428 observations and 2 phenoData annotations.
Details
The data is normalized using the mean of two housekeeping genes.
The difference between guo and guo_norm is the LoD being set to 10 in the former, making it usable with the censor_val parameter of DiffusionMap.
Value
an ExpressionSet with 48 features and 428 observations containing qPCR Ct values and a "num.cells" observation annotation.
Author(s)
Guoji Guo, Mikael Huss, Guo Qing Tong, Chaoyang Wang, Li Li Sun, Neil D. Clarke, Paul Robson robsonp@gis.a-star.edu.sg
References
http://www.sciencedirect.com/science/article/pii/S1534580710001103
destiny documentation built on Nov. 8, 2020, 7:38 p.m.
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Description Usage Format Details Value Author(s) References
Description
Gene expression data of 48 genes and an annotation column $num_cells containing the cell stage at which the embryos were harvested.
Usage
1 2 |
Format
An ExpressionSet with 48 features, 428 observations and 2 phenoData annotations.
Details
The data is normalized using the mean of two housekeeping genes.
The difference between guo and guo_norm is the LoD being set to 10 in the former, making it usable with the censor_val parameter of DiffusionMap.
Value
an ExpressionSet with 48 features and 428 observations containing qPCR Ct values and a "num.cells" observation annotation.
Author(s)
Guoji Guo, Mikael Huss, Guo Qing Tong, Chaoyang Wang, Li Li Sun, Neil D. Clarke, Paul Robson robsonp@gis.a-star.edu.sg
References
http://www.sciencedirect.com/science/article/pii/S1534580710001103
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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