accessors: Accessors for a "DEXUSResult".
In dexus: DEXUS - Identifying Differential Expression in RNA-Seq Studies with Unknown Conditions or without Replicates
Description
Arguments
Value
Author(s)
Examples
Description
These generic functions return the slots of an RNA-Seq
analysis performed by DEXUS. The results of DEXUS are
stored as an instance of DEXUSResult-class.
Arguments
object
An instance of "DEXUSResult".
Value
The accessor functions return a the matrices or vectors
contained in the corresponding slot of the "DEXUSResult".
Author(s)
Guenter Klambauer klambauer@bioinf.jku.at and
Thomas Unterthiner unterthiner@bioinf.jku.at
Examples
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data(dexus)
result <- dexus(countsBottomly[1:20,1:10])
transcriptNames(result)
sampleNames(result)
inputData(result)
normalizedData(result)
sizeFactors(result)
INIValues(result)
INIThreshold(result)
INICalls(result)
pvals(result)
responsibilities(result)
posteriorProbs(result)
logFC(result)
conditionSizes(result)
sizeParameters(result)
means(result)
dispersions(result)
params(result)
dexus documentation built on Nov. 8, 2020, 11:08 p.m.
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Description Arguments Value Author(s) Examples
Description
These generic functions return the slots of an RNA-Seq
analysis performed by DEXUS. The results of DEXUS are
stored as an instance of DEXUSResult-class.
Arguments
object |
An instance of "DEXUSResult". |
Value
The accessor functions return a the matrices or vectors contained in the corresponding slot of the "DEXUSResult".
Author(s)
Guenter Klambauer klambauer@bioinf.jku.at and Thomas Unterthiner unterthiner@bioinf.jku.at
Examples
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 | data(dexus)
result <- dexus(countsBottomly[1:20,1:10])
transcriptNames(result)
sampleNames(result)
inputData(result)
normalizedData(result)
sizeFactors(result)
INIValues(result)
INIThreshold(result)
INICalls(result)
pvals(result)
responsibilities(result)
posteriorProbs(result)
logFC(result)
conditionSizes(result)
sizeParameters(result)
means(result)
dispersions(result)
params(result)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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