Files in diffcyt

Differential discovery in high-dimensional cytometry via high-resolution clustering

README.md

NAMESPACE

DESCRIPTION

LICENSE

build/vignette.rds

R/diffcyt_wrapper.R R/2_transformData.R R/testDS_limma.R R/calcMediansByClusterMarker.R R/calcMedians.R R/1_prepareData.R R/calcMediansBySampleMarker.R R/createContrast.R R/testDA_edgeR.R R/plotHeatmap.R R/testDS_LMM.R R/testDA_GLMM.R R/calcCounts.R R/createFormula.R R/createDesignMatrix.R R/topTable.R R/topClusters.R R/3_generateClusters.R R/testDA_voom.R

vignettes/diffcyt.png

vignettes/diffcyt_workflow.Rmd man/calcMedians.Rd man/transformData.Rd man/prepareData.Rd man/calcCounts.Rd man/testDS_LMM.Rd man/plotHeatmap.Rd man/createContrast.Rd man/createFormula.Rd man/topTable.Rd man/calcMediansBySampleMarker.Rd man/testDA_edgeR.Rd man/diffcyt.Rd man/createDesignMatrix.Rd man/generateClusters.Rd man/calcMediansByClusterMarker.Rd man/testDS_limma.Rd man/testDA_GLMM.Rd man/testDA_voom.Rd man/topClusters.Rd tests/testthat.R tests/testthat/test_prepareData.R tests/testthat/helper_create_example_data.R

inst/NEWS

inst/doc/diffcyt_workflow.R

inst/doc/diffcyt_workflow.html

inst/doc/diffcyt_workflow.Rmd

diffcyt documentation built on Nov. 8, 2020, 6:37 p.m.