Description Usage Format Source
Example results from methylation analysis of human chromosome 11 using the minfi::minfi-package
package
of TCGA 450k beadarray samples. This object contains probe cluster level methylation estimates from
minfi::blockFinder()
.
1 |
A GRanges
object with 7135 ranges and mcols
:
id
probe cluster id
type
probe cluster type
blockgroup
probe cluster block group
diff
raw methylation percentage difference between normal and tumor
smooth
smooth methylation percentage difference between normal and tumor
normalMean
mean methylation estimate for normal samples
cancerMean
mean methylation estimate for cancer samples
TCGA project: https://tcga-data.nci.nih.gov/tcga/
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