fCCAC: functional Canonical Correlation Analysis to evaluate Covariance between nucleic acid sequencing datasets

An application of functional canonical correlation analysis to assess covariance of nucleic acid sequencing datasets such as chromatin immunoprecipitation followed by deep sequencing (ChIP-seq).

Author
Pedro Madrigal <pm12@sanger.ac.uk>
Date of publication
None
Maintainer
Pedro Madrigal <pm12@sanger.ac.uk>
License
Artistic-2.0
Version
1.0.0

View on Bioconductor

Man pages

fccac
functional Canonical Correlation Analysis to evaluate...
fCCAC-internal
fCCAC internal functions
fCCAC-package
functional Canonical Correlation Analysis to evaluate...
heatmapfCCAC
Heatmap of F values obtained by Canonical Correlation...

Files in this package

fCCAC/DESCRIPTION
fCCAC/NAMESPACE
fCCAC/NEWS
fCCAC/R
fCCAC/R/fccac.R
fCCAC/R/heatmapfCCAC.R
fCCAC/R/multiplot.R
fCCAC/build
fCCAC/build/vignette.rds
fCCAC/inst
fCCAC/inst/CITATION
fCCAC/inst/doc
fCCAC/inst/doc/fCCAC.R
fCCAC/inst/doc/fCCAC.Rnw
fCCAC/inst/doc/fCCAC.pdf
fCCAC/inst/extdata
fCCAC/inst/extdata/chr21_H3K4me3_1.bw
fCCAC/inst/extdata/chr21_H3K4me3_2.bw
fCCAC/inst/extdata/chr21_H3K4me3_3.bw
fCCAC/inst/extdata/chr21_merged_ACT_K4.bed
fCCAC/inst/unitTests
fCCAC/inst/unitTests/test_fCCAC.R
fCCAC/man
fCCAC/man/fCCAC-internal.Rd
fCCAC/man/fCCAC-package.Rd
fCCAC/man/fccac.Rd
fCCAC/man/heatmapfCCAC.Rd
fCCAC/tests
fCCAC/tests/runTests.R
fCCAC/vignettes
fCCAC/vignettes/fCCAC.Rnw