preview: Alteration and Varible Preview

In facopy: Feature-based association and gene-set enrichment for copy number alteration analysis in cancer

Description

A wrapper function for variableSummary, alterationSummary and variableCor.

Usage

preview(fad, folder = NULL)

Arguments

fad	facopyInfo object with a certain study's facopy data.
folder	Optional. A character specifying the name of the file to which to output the table with variable correlations.

Details

A list of data.frame is always returned, and optionally written to files in a specified folder.

Value

A list of data.frame with the results of calling the functions variableSummary, alterationSummary and variableCor.

Author(s)

David Mosen-Ansorena

Examples

data(myStudy) # load example study

myCallsPreview = preview(myStudy)

myCallsPreview$byVar
head(myCallsPreview$byAlt)
myCallsPreview$varCor

facopy documentation built on May 2, 2018, 2:30 a.m.