flowAI: Automatic and interactive quality control for flow cytometry data

The package is able to perform an automatic or interactive quality control on FCS data acquired using flow cytometry instruments. By evaluating three different properties: 1) flow rate, 2) signal acquisition, 3) dynamic range, the quality control enables the detection and removal of anomalies.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("flowAI")
AuthorGianni Monaco, Hao Chen
Bioconductor views BiomedicalInformatics FlowCytometry QualityControl
Date of publicationNone
MaintainerGianni Monaco <gianni@liverpool.ac.uk>
LicenseGPL
Version1.2.10

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
R
R/anomaly-detection.R R/auto-qc.R R/cffilter.R R/data.R R/flow-rate.R R/flow-set.R R/margins.R R/shiny.R R/signal.R R/support-qc.R
build
build/vignette.rds
data
data/Bcells.rda
data/datalist
inst
inst/NEWS
inst/doc
inst/doc/flowAI.R
inst/doc/flowAI.Rmd
inst/doc/flowAI.html
inst/rmd
inst/rmd/autoQC_report.Rmd
inst/shiny
inst/shiny/global.R inst/shiny/server.R inst/shiny/ui.R
man
man/Bcells.Rd man/flow_auto_qc.Rd man/flow_iQC.Rd
vignettes
vignettes/autoflowrate.png
vignettes/autosignal.png
vignettes/flowAI.Rmd
vignettes/hist_set.png
vignettes/iQCrate.png
vignettes/margins.png

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.