select.particles: Performs filtering on a 'ParticleSet' object

In flowcatchR: Tools to analyze in vivo microscopy imaging data focused on tracking flowing blood cells

Description

According to parameters of interests, such as size, eccentricity/shape, filters out the particles that do not satisfy the indicated requirements

Usage

select.particles(particleset, min.area = 1, max.area = 1000)

Arguments

particleset	A ParticleSet object. A LinkedParticleSet object can also be provided as input, yet the returned object will be a ParticleSet object that needs to be linked again
min.area	Size in pixels of the minimum area needed to detect the object as a potential particle of interest
max.area	Size in pixels of the maximum area allowed to detect the object as a potential particle of interest

Value

A ParticleSet object

Author(s)

Federico Marini, [e-mail], 2014

Examples

data("candidate.platelets")
selected.platelets <- select.particles(candidate.platelets, min.area = 5)
selected.platelets

flowcatchR documentation built on Nov. 8, 2020, 5:04 p.m.