print.gagafit: Print an object of class gagafit or nnfit

Description Usage Arguments Details Value Author(s) See Also

Description

Prints an object of class gagafit (as returned by fitGG or parest) or class nnfit. Provides general information and hyper-parameter estimates, if available.

Usage

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## S3 method for class 'gagafit'
print(x,...)
## S3 method for class 'nnfit'
print(x,...)

Arguments

x

Object of type gagafit or nnfit.

...

Other arguments to be passed on to the generic print function.

Details

fitGG does not create a complete gagafit object. The complete object is returned by parest, which computes the posterior probabilities of differential expression and obtain hyper-parameter estimates (these are only provided by fitGG when the option method='EBayes' is used).

Value

Prints number of genes, hypotheses, details about the model fitting and hyper-parameter estimates (when available).

Author(s)

David Rossell

See Also

fitGG, fitNN, parest



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