readBam: readBam function

In genomation: Summary, annotation and visualization of genomic data

Description

given a big bam path reads the big wig file into a RleList to be used by ScoreMatrix:char,GRanges

Usage

readBam(target, windows, rpm = FALSE, unique = FALSE, extend = 0,
  param = NULL, paired.end = FALSE, library.size = NULL, ...)

Arguments

target	target object
windows	windows
rpm	logical
unique	logical
extend	numeric
param	ScanBamParam object
paired.end	llogical
library.size	numeric
...	additional parameters

genomation documentation built on Nov. 8, 2020, 5:21 p.m.