API for genphen
A tool for quantification of associations between genotypes and phenotypes in genome wide association studies (GWAS) with Bayesian inference and statistical learning
| Global functions | |
|---|---|
| checkDiagnosticInput | Source code |
| checkDotParameters | Source code |
| checkInput | Source code |
| checkInputPhyloBias | Source code |
| convertMsaToGenotype | Source code |
| dichotomous.phenotype.saap | Man page |
| genotype.saap | Man page |
| genotype.saap.msa | Man page |
| genotype.snp | Man page |
| genotype.snp.msa | Man page |
| getBhattacharyya | Source code |
| getHdi | Source code |
| getKappa | Source code |
| getParetoScores | Source code |
| getPhyloBias | Source code |
| getPhyloData | Source code |
| getPpc | Source code |
| getScores | Source code |
| getStanData | Source code |
| phenotype.saap | Man page |
| phenotype.snp | Man page |
| runBayesianInference | Source code |
| runDiagnostics | Man page Source code |
| runGenphen | Man page Source code |
| runPhyloBiasCheck | Man page Source code |
| runStatLearn | Source code |
