phenotype.snp: Continuous phenotype dataset

In genphen: A tool for quantification of associations between genotypes and phenotypes in genome wide association studies (GWAS) with Bayesian inference and statistical learning

Description

The phenotype data is a numerical vector of length 51. It represents 51 measured phenotypes for 51 laboratory mouse strains. It is to be used as a dependent variable in combination with the SNP genotype data, in order to compute the association between each of the SNPs and the phenotype.

Usage

data(phenotype.snp)

Format

A numerical vector with 51 elements (laboratory mice) which correspond to the rows of he genotype data.

Value

Vector of 51 metric elements, representing phenotypes measured for 51 laboratory mice.

Examples

data(phenotype.snp)

Example output

Loading required package: randomForest
randomForest 4.6-14
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Attaching package: 'ggplot2'

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Attaching package: 'BiocGenerics'

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    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

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    intersect, is.unsorted, lapply, lengths, mapply, match, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
    rowMeans, rowSums, rownames, sapply, setdiff, sort, table, tapply,
    union, unique, unsplit, which, which.max, which.min

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genphen documentation built on Nov. 8, 2020, 5:03 p.m.