stringDBhomoSapiens: Download protein-protein interactions from STRING DB

In glmSparseNet: Network Centrality Metrics for Elastic-Net Regularized Models

Description

Download protein-protein interactions from STRING DB

Usage

stringDBhomoSapiens(version = "10", score_threshold = 0, remove.text = TRUE)

Arguments

version	version of the database to use
score_threshold	remove scores below threshold
remove.text	remove text mining-based scores

Value

a data.frame with rows representing an interaction between two proteins, and columns the count of scores above the given score_threshold

Examples

## Not run: 
    stringDBhomoSapiens(score_threshold = 800)

## End(Not run)

glmSparseNet documentation built on April 14, 2021, 6 p.m.