Files in gscreend

Analysis of pooled genetic screens

README.md

NEWS

NAMESPACE

DESCRIPTION

build/vignette.rds

R/core.R R/AllGenerics.R R/AllMethods.R R/Normalization.R R/AllClasses.R R/DataInput.R R/GeneRanking.R R/sgrnaRanking.R R/QualityControl.R vignettes/gscreend_simulated_data.Rmd man/GeneData-PoolScreenExp-method.Rd man/PoolScreenExp-class.Rd man/createPoolScreenExpFromSE.Rd man/calculateIntervalFits.Rd man/calculateLFC.Rd man/defineFittingIntervals.Rd man/assignGeneData.Rd man/sgRNAData-PoolScreenExp-method.Rd man/ResultsTable.Rd man/GeneData.Rd man/RunGscreend.Rd man/plotReplicateCorrelation.Rd man/normalizePoolScreenExp.Rd man/calculatePValues.Rd man/plotModelParameters.Rd man/createPoolScreenExp.Rd man/fit_least_quantile.Rd man/sgRNAData.Rd tests/testthat.R tests/testthat/test_1_input.R tests/testthat/test_3_calculations.R tests/testthat/test_2_QC.R

inst/CITATION

inst/doc/gscreend_simulated_data.html

inst/doc/gscreend_simulated_data.R inst/doc/gscreend_simulated_data.Rmd

inst/extdata/gscreend_analysed_experiment.RData

inst/extdata/simulated_counts.txt

inst/script/generate_simulated_counts.txt

gscreend documentation built on Nov. 8, 2020, 7:18 p.m.