htSeqTools: Quality Control, Visualization and Processing for High-Throughput Sequencing data

We provide efficient, easy-to-use tools for High-Throughput Sequencing (ChIP-seq, RNAseq etc.). These include MDS plots (analogues to PCA), detecting inefficient immuno-precipitation or over-amplification artifacts, tools to identify and test for genomic regions with large accumulation of reads, and visualization of coverage profiles.

Package details

AuthorEvarist Planet, Camille Stephan-Otto, Oscar Reina, Oscar Flores, David Rossell
Bioconductor views QualityControl Sequencing
MaintainerOscar Reina <>
LicenseGPL (>=2)
Package repositoryView on Bioconductor
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htSeqTools documentation built on May 6, 2019, 3:39 a.m.