htSeqTools: Quality Control, Visualization and Processing for High-Throughput Sequencing data
Version 1.26.0

We provide efficient, easy-to-use tools for High-Throughput Sequencing (ChIP-seq, RNAseq etc.). These include MDS plots (analogues to PCA), detecting inefficient immuno-precipitation or over-amplification artifacts, tools to identify and test for genomic regions with large accumulation of reads, and visualization of coverage profiles.

Package details

AuthorEvarist Planet, Camille Stephan-Otto, Oscar Reina, Oscar Flores, David Rossell
Bioconductor views QualityControl Sequencing
MaintainerOscar Reina <[email protected]>
LicenseGPL (>=2)
Version1.26.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("htSeqTools")

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htSeqTools documentation built on Nov. 17, 2017, 9:10 a.m.