Description Objects from the Class Slots Methods Author(s) See Also Examples

Classical Multi-Dimensional Scaling Fit. Function
`cmds`

creates object of this class.

Objects can be created by calls of the form `new("cmdsFit", ...)`

.

`points`

:Object of class

`"matrix"`

with (x,y) coordinates in the approximated space.`d`

:Object of class

`"matrix"`

with original distances between individuals.`dapprox`

:Object of class

`"matrix"`

with distances between individuals in the approximated space.`R.square`

:Percentage of variability in

`d`

explained by`dapprox`

(object of class`"numeric"`

)

There are `show`

and `plot`

methods defined for this class.

David Rossell

`cmdscale`

from package base.

1 | ```
showClass("cmdsFit")
``` |

htSeqTools documentation built on May 31, 2017, 11:13 a.m.

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