karyoploteR: Plot customizable linear genomes displaying arbitrary data

karyoploteR creates karyotype plots of arbitrary genomes and offers a complete set of functions to plot arbitrary data on them. It mimicks many R base graphics functions coupling them with a coordinate change function automatically mapping the chromosome and data coordinates into the plot coordinates. In addition to the provided data plotting functions, it is easy to add new ones.

Package details

AuthorBernat Gel <bgel@igtp.cat>
Bioconductor views ChIPSeq CopyNumberVariation Coverage DNASeq DataImport MethylSeq OneChannel Sequencing Visualization
MaintainerBernat Gel <bgel@igtp.cat>
URL https://github.com/bernatgel/karyoploteR
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


Try the karyoploteR package in your browser

Any scripts or data that you put into this service are public.

karyoploteR documentation built on Nov. 8, 2020, 5:52 p.m.