The 'les' package estimates Loci of Enhanced Significance (LES) in tiling microarray data. These are regions of regulation such as found in differential transcription, CHiP-chip, or DNA modification analysis. The package provides a universal framework suitable for identifying differential effects in tiling microarray data sets, and is independent of the underlying statistics at the level of single probes.
|Author||Julian Gehring, Clemens Kreutz, Jens Timmer|
|Date of publication||None|
|Maintainer||Julian Gehring <firstname.lastname@example.org>|
Les-class: Class 'Les'
les-internal: Internal functions of the 'les' package.
les-package: Identifying Differential Effects in Tiling Microarray Data
plot: plot method for class Les
spikeInData: Spike-in ChIP-chip data set
spikeInStat: Spike-in ChIP-chip data set
weighting: Weighting functions