mBPCR: Bayesian Piecewise Constant Regression for DNA copy number estimation

It contains functions for estimating the DNA copy number profile using mBPCR with the aim of detecting regions with copy number changes.

Getting started

Package details

AuthorP.M.V. Rancoita <rancoita.paola@gmail.com>, with contributions from M. Hutter <marcus.hutter@anu.edu.au>
Bioconductor views CopyNumberVariation Microarray SNP aCGH
MaintainerP.M.V. Rancoita <rancoita.paola@gmail.com>
LicenseGPL (>= 2)
Version1.44.0
URL http://www.idsia.ch/~paola/mBPCR
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("mBPCR")

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mBPCR documentation built on Nov. 8, 2020, 8:05 p.m.