maCorrPlot: Visualize artificial correlation in microarray data
Version 1.46.0

Graphically displays correlation in microarray data that is due to insufficient normalization

Browse man pages Browse package API and functions Browse package files

AuthorAlexander Ploner <Alexander.Ploner@ki.se>
Bioconductor views Microarray Preprocessing Visualization
Date of publicationNone
MaintainerAlexander Ploner <Alexander.Ploner@ki.se>
LicenseGPL (>= 2)
Version1.46.0
URL http://www.pubmedcentral.gov/articlerender.fcgi?tool=pubmed&pubmedid=15799785
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("maCorrPlot")

Man pages

CorrSample: Sample correlations for random pairs of genes
CutCI: Calculate confidence intervals for grouped values
oligodata: Example data for package maCorrSample
plot.corr.sample: Plot correlation of random pairs of genes

Functions

CIrho Man page Source code
CorrSample Man page Source code
CutCI Man page Source code
RandPairs Man page Source code
datA.amp Man page
datA.mas5 Man page
datA.rma Man page
datB.amp Man page
datB.mas5 Man page
datB.rma Man page
oligodata Man page
panel.corr.sample Man page Source code
plot.corr.sample Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/maCorrPlot.R
build
build/vignette.rds
data
data/oligodata.rda
inst
inst/doc
inst/doc/maCorrPlot.R
inst/doc/maCorrPlot.Rnw
inst/doc/maCorrPlot.pdf
man
man/CorrSample.Rd
man/CutCI.Rd
man/oligodata.Rd
man/plot.corr.sample.Rd
vignettes
vignettes/maCorrPlot.Rnw
vignettes/pix
vignettes/pix/maCorrPlot-005.pdf
vignettes/pix/maCorrPlot-006.pdf
vignettes/pix/maCorrPlot-007.pdf
vignettes/pix/maCorrPlot-008.pdf
vignettes/pix/maCorrPlot-009.pdf
vignettes/pix/maCorrPlot-010.pdf
vignettes/pix/maCorrPlot-011.pdf
vignettes/pix/maCorrPlot-012.pdf
vignettes/pix/maCorrPlot-013.pdf
vignettes/pix/maCorrPlot-015.pdf
vignettes/pix/maCorrPlot-016.pdf
vignettes/pix/maCorrPlot-018.pdf
vignettes/pix/maCorrPlot-019.pdf
vignettes/pix/maCorrPlot-021.pdf
vignettes/pix/maCorrPlot-022.pdf
vignettes/pix/maCorrPlot-023.pdf
maCorrPlot documentation built on May 20, 2017, 9:46 p.m.