API for marray
Exploratory analysis for two-color spotted microarray data

Global functions
SFGL	Man page
ShowLargeObject-class	Man page
SwirlSample	Man page
SwirlSample.txt	Man page
UCBFGL	Man page
URLstring	Man page
[	Man page
[,marrayInfo-method	Man page
[,marrayLayout-method	Man page
[,marrayNorm-method	Man page
[,marrayRaw-method	Man page
[-methods	Man page
addLines	Man page Source code
addPoints	Man page Source code
addText	Man page Source code
as	Man page
boxplot,marrayNorm-method	Man page
boxplot,marrayRaw-method	Man page
cbind,marrayNorm-method	Man page
cbind,marrayRaw-method	Man page
cbind.marrayNorm	Man page Source code
cbind.marrayRaw	Man page Source code
checkTargetInfo	Man page Source code
coerce	Man page
coerce,marrayNorm,marraySpots-method	Man page
coerce,marrayRaw,marrayNorm-method	Man page Man page
coerce-methods	Man page
controlCode	Man page
cor.na	Man page Source code
dim.marrayInfo	Man page Source code
dim.marrayNorm	Man page Source code
dim.marrayRaw	Man page Source code
findID	Man page Source code
fish.gal	Man page
gsubAnchor	Man page
htmlPage	Man page Source code
image,marrayNorm-method	Man page
image,marrayRaw-method	Man page
length.na	Man page Source code
lines,marrayNorm-method	Man page
lines,marrayRaw-method	Man page
log.na	Man page Source code
ma2D	Man page Source code
maA	Man page Man page
maA,marrayNorm-method	Man page
maA,marrayRaw-method	Man page
maA<-	Man page
maA<-,marrayNorm,matrix-method	Man page
maBoxplot	Man page Source code
maColorBar	Man page Source code
maCompCoord	Man page Source code
maCompInd	Man page Source code
maCompLayout	Man page Source code
maCompNormA	Man page Source code
maCompNormEq	Man page Source code
maCompPlate	Man page
maControls	Man page Man page
maControls,marrayLayout-method	Man page
maControls,marrayNorm-method	Man page
maControls,marrayRaw-method	Man page
maControls<-	Man page
maControls<-,marrayLayout-method	Man page
maControls<-,marrayNorm-method	Man page
maControls<-,marrayRaw-method	Man page
maCoord2Ind	Man page
maDefaultPar	Man page Source code
maDotsDefaults	Man page Source code
maDotsMatch	Man page Source code
maGb	Man page
maGb,marrayRaw-method	Man page
maGb<-	Man page
maGb<-,marrayRaw,NULL-method	Man page
maGb<-,marrayRaw,matrix-method	Man page
maGenControls	Man page Source code
maGeneTable	Man page Source code
maGf	Man page
maGf,marrayRaw-method	Man page
maGf<-	Man page
maGf<-,marrayRaw,matrix-method	Man page
maGnames	Man page
maGnames,marrayNorm-method	Man page
maGnames,marrayRaw-method	Man page
maGnames<-	Man page
maGnames<-,marrayNorm,marrayInfo-method	Man page Man page
maGnames<-,marrayRaw,marrayInfo-method	Man page Man page
maGnames<-,marraySpots,marrayInfo-method	Man page
maGridCol	Man page
maGridCol,marrayLayout-method	Man page
maGridCol,marrayNorm-method	Man page
maGridCol,marrayRaw-method	Man page
maGridRow	Man page Man page
maGridRow,marrayLayout-method	Man page
maGridRow,marrayNorm-method	Man page
maGridRow,marrayRaw-method	Man page
maImage	Man page Source code
maImage.func	Man page Source code
maInd2Coord	Man page
maInfo	Man page
maInfo,marrayInfo-method	Man page
maInfo<-	Man page
maInfo<-,marrayInfo,data.frame-method	Man page
maLG	Man page
maLG,marrayNorm-method	Man page
maLG,marrayRaw-method	Man page
maLR	Man page
maLR,marrayNorm-method	Man page
maLR,marrayRaw-method	Man page
maLabels	Man page
maLabels,marrayInfo-method	Man page
maLabels<-	Man page
maLabels<-,marrayInfo,character-method	Man page
maLabels<-,marrayInfo,numeric-method	Man page
maLayout	Man page
maLayout,marrayNorm-method	Man page
maLayout,marrayRaw-method	Man page
maLayout<-	Man page
maLayout<-,marrayNorm,marrayLayout-method	Man page Man page
maLayout<-,marrayRaw,marrayLayout-method	Man page Man page
maLegendLines	Man page Source code
maLoess	Man page
maLoessLines	Man page Source code
maLowessLines	Man page Source code
maM	Man page Man page
maM,marrayNorm-method	Man page
maM,marrayRaw-method	Man page
maM<-	Man page
maM<-,marrayNorm,matrix-method	Man page
maMAD	Man page Source code
maMed	Man page Source code
maMloc	Man page
maMloc,marrayNorm-method	Man page
maMloc<-	Man page
maMloc<-,marrayNorm,matrix-method	Man page
maMscale	Man page
maMscale,marrayNorm-method	Man page
maMscale<-	Man page
maMscale<-,marrayNorm,matrix-method	Man page
maNgc	Man page Man page
maNgc,marrayLayout-method	Man page
maNgc,marrayNorm-method	Man page
maNgc,marrayRaw-method	Man page
maNgc<-	Man page
maNgc<-,marrayLayout,numeric-method	Man page
maNgc<-,marrayNorm,numeric-method	Man page
maNgc<-,marrayRaw,numeric-method	Man page
maNgr	Man page Man page
maNgr,marrayLayout-method	Man page
maNgr,marrayNorm-method	Man page
maNgr,marrayRaw-method	Man page
maNgr<-	Man page
maNgr<-,marrayLayout,numeric-method	Man page
maNgr<-,marrayNorm,numeric-method	Man page
maNgr<-,marrayRaw,numeric-method	Man page
maNorm	Man page Source code
maNorm2D	Man page Source code
maNormCall	Man page
maNormCall,marrayNorm-method	Man page
maNormLoess	Man page Source code
maNormMAD	Man page Source code
maNormMain	Man page Source code
maNormMed	Man page Source code
maNormScale	Man page Source code
maNotes	Man page Man page Man page
maNotes,marrayInfo-method	Man page
maNotes,marrayLayout-method	Man page
maNotes,marrayNorm-method	Man page
maNotes,marrayRaw-method	Man page
maNotes<-	Man page
maNotes<-,marrayInfo,character-method	Man page
maNotes<-,marrayLayout,character-method	Man page
maNotes<-,marrayNorm,character-method	Man page
maNotes<-,marrayRaw,character-method	Man page
maNsamples	Man page
maNsamples,marrayNorm-method	Man page
maNsamples,marrayRaw-method	Man page
maNsc	Man page Man page
maNsc,marrayLayout-method	Man page
maNsc,marrayNorm-method	Man page
maNsc,marrayRaw-method	Man page
maNsc<-	Man page
maNsc<-,marrayLayout,numeric-method	Man page
maNsc<-,marrayNorm,numeric-method	Man page
maNsc<-,marrayRaw,numeric-method	Man page
maNspots	Man page Man page
maNspots,marrayLayout-method	Man page
maNspots,marrayNorm-method	Man page
maNspots,marrayRaw-method	Man page
maNspots<-	Man page
maNspots<-,marrayLayout,numeric-method	Man page
maNspots<-,marrayNorm,numeric-method	Man page
maNspots<-,marrayRaw,numeric-method	Man page
maNsr	Man page Man page
maNsr,marrayLayout-method	Man page
maNsr,marrayNorm-method	Man page
maNsr,marrayRaw-method	Man page
maNsr<-	Man page
maNsr<-,marrayLayout,numeric-method	Man page
maNsr<-,marrayNorm,numeric-method	Man page
maNsr<-,marrayRaw,numeric-method	Man page
maNum2Logic	Man page Source code
maPalette	Man page Source code
maPlate	Man page Man page
maPlate,marrayLayout-method	Man page
maPlate,marrayNorm-method	Man page
maPlate,marrayRaw-method	Man page
maPlate<-	Man page
maPlate<-,marrayLayout-method	Man page
maPlate<-,marrayNorm-method	Man page
maPlate<-,marrayRaw-method	Man page
maPlot	Man page Source code
maPlot.func	Man page Source code
maPrintTip	Man page Man page
maPrintTip,marrayLayout-method	Man page
maPrintTip,marrayNorm-method	Man page
maPrintTip,marrayRaw-method	Man page
maRb	Man page
maRb,marrayRaw-method	Man page
maRb<-	Man page
maRb<-,marrayRaw,NULL-method	Man page
maRb<-,marrayRaw,matrix-method	Man page
maRf	Man page
maRf,marrayRaw-method	Man page
maRf<-	Man page
maRf<-,marrayRaw,matrix-method	Man page
maSelectGnames	Man page Source code
maSpotCol	Man page Man page
maSpotCol,marrayLayout-method	Man page
maSpotCol,marrayNorm-method	Man page
maSpotCol,marrayRaw-method	Man page
maSpotRow	Man page Man page
maSpotRow,marrayLayout-method	Man page
maSpotRow,marrayNorm-method	Man page
maSpotRow,marrayRaw-method	Man page
maSub	Man page Man page
maSub,marrayLayout-method	Man page
maSub,marrayNorm-method	Man page
maSub,marrayRaw-method	Man page
maSub<-	Man page
maSub<-,marrayLayout,logical-method	Man page
maSub<-,marrayLayout,numeric-method	Man page
maSub<-,marrayNorm-method	Man page
maSub<-,marrayRaw-method	Man page
maTargets	Man page
maTargets,marrayNorm-method	Man page
maTargets,marrayRaw-method	Man page
maTargets<-	Man page
maTargets<-,marrayNorm,marrayInfo-method	Man page Man page
maTargets<-,marrayRaw,marrayInfo-method	Man page Man page
maText	Man page
maTop	Man page Source code
maTwoSamples	Man page Source code
maW	Man page
maW,marrayNorm-method	Man page
maW,marrayRaw-method	Man page
maW<-	Man page
maW<-,marrayNorm,matrix-method	Man page
maW<-,marrayRaw,matrix-method	Man page
mapGeneInfo	Man page Source code
marrayInfo	Man page
marrayInfo-class	Man page
marrayLayout	Man page
marrayLayout-class	Man page
marrayNorm	Man page
marrayNorm-class	Man page
marrayRaw	Man page
marrayRaw-class	Man page
mean.na	Man page Source code
opVersionID	Man page Source code
order.na	Man page
plot.gene.cluster	Man page
plot.marrayNorm	Man page
plot.marrayRaw	Man page
points,marrayNorm-method	Man page
points,marrayRaw-method	Man page
print	Man page
print,marrayInfo-method	Man page
print,marrayLayout-method	Man page
print,marrayNorm-method	Man page
print,marrayRaw-method	Man page
print-methods	Man page Man page
prod.na	Man page
quantile.na	Man page Source code
rbind,marrayInfo-method	Man page
rbind.marrayInfo	Man page Source code
read.Agilent	Man page Source code
read.Galfile	Man page
read.GenePix	Man page Source code
read.SMD	Man page Source code
read.Spot	Man page Source code
read.fname	Man page Source code
read.marrayInfo	Man page Source code
read.marrayLayout	Man page Source code
read.marrayRaw	Man page Source code
rm.na	Man page Source code
scale.na	Man page Source code
show,ShowLargeObject-method	Man page
show,marrayNorm-method	Man page
show,marrayRaw-method	Man page
show-methods	Man page
stat.confband.text	Man page
stat.gene.cluster	Man page
stat.gnames	Man page Source code
sum.na	Man page Source code
summary,marrayInfo-method	Man page
summary,marrayLayout-method	Man page
summary,marrayNorm-method	Man page
summary,marrayRaw-method	Man page
summary-methods	Man page
swirl	Man page
swirl.1.spot	Man page
swirl.2.spot	Man page
swirl.3.spot	Man page
swirl.4.spot	Man page
table2html	Man page
tablegen	Man page Source code
text,marrayNorm-method	Man page
text,marrayRaw-method	Man page
var.na	Man page Source code
widget.TwoSamples	Man page Source code
widget.mapGeneInfo	Man page Source code
widget.marrayInfo	Man page Source code
widget.marrayLayout	Man page Source code
widget.marrayRaw	Man page Source code
write.list	Man page
write.marray	Man page Source code
write.xls	Man page Source code