annotation-Maser-method: Retrieve annotation of splicing events from a maser object.

Description Usage Arguments Value Examples

Description

Retrieve annotation of splicing events from a maser object.

Usage

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## S4 method for signature 'Maser'
annotation(object, type = c("A3SS", "A5SS", "SE", "RI",
  "MXE"))

Arguments

object

a maser object.

type

a character indicating the splice type. Possible values are c("A3SS", "A5SS", "SE", "RI", "MXE").

Value

a data.frame.

Examples

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path <- system.file("extdata", file.path("MATS_output"), package = "maser")
hypoxia <- maser(path, c("Hypoxia 0h", "Hypoxia 24h"))
head(annotation(hypoxia, "SE"))

maser documentation built on March 16, 2021, 6:01 p.m.