metaArray: Integration of Microarray Data for Meta-analysis

1) Data transformation for meta-analysis of microarray Data: Transformation of gene expression data to signed probability scale (MCMC/EM methods) 2) Combined differential expression on raw scale: Weighted Z-score after stabilizing mean-variance relation within platform

AuthorDebashis Ghosh <ghoshd@psu.edu> Hyungwon Choi <hyung_won_choi@nuhs.edu.sg>
Date of publicationNone
MaintainerHyungwon Choi <hyung_won_choi@nuhs.edu.sg>
LicenseLGPL-2
Version1.52.0

View on Bioconductor

Files in this package

metaArray/DESCRIPTION
metaArray/NAMESPACE
metaArray/R
metaArray/R/Zscore.R metaArray/R/em.draw.R metaArray/R/find.init.R metaArray/R/fit.em.R metaArray/R/intcor.R metaArray/R/logit.R metaArray/R/poe.em.R metaArray/R/poe.mcmc.R
metaArray/build
metaArray/build/vignette.rds
metaArray/data
metaArray/data/datalist
metaArray/data/mdata.R
metaArray/inst
metaArray/inst/doc
metaArray/inst/doc/metaArray.R
metaArray/inst/doc/metaArray.Rnw
metaArray/inst/doc/metaArray.pdf
metaArray/man
metaArray/man/Zscore.Rd metaArray/man/em.draw.Rd metaArray/man/find.init.Rd metaArray/man/fit.em.Rd metaArray/man/intcor.Rd metaArray/man/logit.Rd metaArray/man/mdata.Rd metaArray/man/poe.em.Rd metaArray/man/poe.mcmc.Rd
metaArray/src
metaArray/src/Makevars
metaArray/src/Makevars.win
metaArray/src/contr.c
metaArray/src/dproc.c
metaArray/src/dproc2.c
metaArray/src/intcor.c
metaArray/src/lowess.c
metaArray/src/meta.h
metaArray/src/mmath.c
metaArray/src/perm.c
metaArray/src/poe.c
metaArray/vignettes
metaArray/vignettes/metaArray.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.