Files in metaMS

MS-based metabolomics annotation pipeline

README.md

NEWS

NAMESPACE

DESCRIPTION

build/vignette.rds

data/errf.RData

data/threeStdsDB.RData

data/LCDBtest.RData

data/LCresults.RData

data/datalist

data/threeStdsNIST.RData

data/exptable.RData

data/FEMsettings.RData

data/GCresults.RData

data/threeStdsInfo.RData

R/createSTDdbLC.R R/runGC.R R/generateStdDBLC.R R/generateStdDBGC.R R/printString.R R/processStandards.R R/msp.R R/relInt.R R/matchSamples2Samples.R R/alignmentLC.R R/getFeatureInfo.R R/annotate.R R/addRI.R R/matchSamples2DB.R R/matchfuns.R R/readStdInfo.R R/plotPseudoSpectrum.R R/annotations2tab.R R/runLC.R R/constructExpPseudoSpectra.R R/createSTDdbGC.R R/getPeakTable.R R/getAnnotationMat.R R/runCAMERA.R R/metaMSsettings.R R/peakDetection.R R/getAnnotationLC.R

vignettes/runGC.Rnw

vignettes/LC.bib

vignettes/GC.bib

vignettes/runLC.Rnw

man/runLC.Rd man/matchSamples2DB.Rd man/alignmentLC.Rd man/getAnnotationLC.Rd man/annotations2tab.Rd man/peakDetection.Rd man/removeDoubleMasses.Rd man/FEMsettings.Rd man/getPeakTable.Rd man/matchSamples2Samples.Rd man/createSTDdbLC.Rd man/processStandards.Rd man/LCresults.Rd man/metaMS-package.Rd man/metaSetting-methods.Rd man/LCDBtest.Rd man/plotPseudoSpectrum.Rd man/getFeatureInfo.Rd man/readStdInfo.Rd man/createSTDdbGC.Rd man/exptable.Rd man/GCresults.Rd man/metaMSsettings-class.Rd man/treat.DB.Rd man/AnnotateTable.Rd man/matchExpSpec.Rd man/runGC.Rd man/threeStdsDB.Rd man/constructExpPseudoSpectra.Rd man/msp.Rd man/addRI.Rd man/runCAMERA.Rd man/printString.Rd man/errf.Rd man/getAnnotationMat.Rd man/match2ExtDB.Rd tests/runTests.R

inst/CITATION

inst/doc/runGC.Rnw

inst/doc/runGC.R inst/doc/runGC.pdf

inst/doc/runLC.Rnw

inst/doc/runLC.pdf inst/doc/runLC.R inst/scripts/LCdata.R inst/scripts/GCdata.R inst/unitTests/test_LC.R inst/unitTests/test_GC.R

metaMS documentation built on Nov. 8, 2020, 8:21 p.m.