metahdep: Hierarchical Dependence in Meta-Analysis
Version 1.34.0

Tools for meta-analysis in the presence of hierarchical (and/or sampling) dependence, including with gene expression studies

Browse man pages Browse package API and functions Browse package files

AuthorJohn R. Stevens, Gabriel Nicholas
Bioconductor views DifferentialExpression Microarray
Date of publicationNone
MaintainerJohn R. Stevens <john.r.stevens@usu.edu>
LicenseGPL-3
Version1.34.0
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("metahdep")

Man pages

ES.obj-class: Class ES.obj
getPLM.es: getPLM.es
gloss: gloss: Data from the JEBS glossing paper
HGU.DifExp.list: HGU.DifExp.list: A list of 4 ES.obj objects
HGU.newnames: HGU.newnames
HGU.prep.list: HGU.prep.list
metahdep: metahdep
metahdep.FEMA: metahdep.FEMA
metahdep.format: metahdep.format
metahdep.HBLM: metahdep.HBLM
metahdep.other: metahdep.other
metahdep.REMA: metahdep.REMA
metaprep-class: Class metaprep

Functions

ES.obj-class Man page
HGU.DifExp.list Man page
HGU.newnames Man page
HGU.prep.list Man page
LinMod.HBLM.fast.dep Man page Source code
LinMod.MetAn.dep.FEMA Man page Source code
LinMod.MetAn.dep.REMA Man page Source code
LinMod.REMA.delta.split Man page Source code
LinMod.REMA.dep Man page Source code
center.columns Man page Source code
get.M Man page Source code
get.varsigma.v Man page Source code
getPLM.es Man page
gloss Man page
gloss.Table1 Man page
gloss.V Man page
gloss.X Man page
gloss.theta Man page
id Man page Source code
metahdep Man page
metahdep.FEMA Man page
metahdep.HBLM Man page
metahdep.REMA Man page
metahdep.check.X Man page Source code
metahdep.format Man page
metahdep.list2dataframe Man page Source code
metaprep-class Man page
mod Man page Source code
new.LinMod.HBLM.fast.dep.delta.split Man page Source code
tr Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/ES.obj.R
R/getPLM.es.R
R/metahdep.FEMA.R
R/metahdep.HBLM.R
R/metahdep.R
R/metahdep.REMA.R
R/metahdep.format.R
R/metahdep.other.R
R/metaprep.R
build
build/vignette.rds
data
data/HGU.DifExp.list.rda
data/HGU.newnames.rda
data/HGU.prep.list.rda
data/gloss.rda
inst
inst/doc
inst/doc/metahdep.R
inst/doc/metahdep.Rnw
inst/doc/metahdep.pdf
man
man/ES.obj-class.Rd
man/HGU.DifExp.list.Rd
man/HGU.newnames.Rd
man/HGU.prep.list.Rd
man/getPLM.es.Rd
man/gloss.Rd
man/metahdep.FEMA.Rd
man/metahdep.HBLM.Rd
man/metahdep.REMA.Rd
man/metahdep.Rd
man/metahdep.format.Rd
man/metahdep.other.Rd
man/metaprep-class.Rd
src
src/metahdep.c
vignettes
vignettes/metahdep.Rnw
metahdep documentation built on May 20, 2017, 10:15 p.m.