get.ucsc.tbl.tpl: Create SQLite UCSC table template defintions
In metaseqR: An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms.
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/metaseqr.query.R
Description
Returns an SQLIte table template defintion,
according to UCSC Genome Browser database
table schemas. This functionality is used
when the package RMySQL is not available
for some reason, e.g. Windows machines.
Internal use only.
Usage
1
get.ucsc.tbl.tpl(tab, what="queries")
Arguments
tab
name of UCSC database table.
what
"queries" for SQLite table
definitions or "fields" for table column names.
Value
An SQLite table definition.
Author(s)
Panagiotis Moulos
Examples
1
db.table.tmpl <- get.ucsc.tbl.tpl("knownCanonical")
metaseqR documentation built on Nov. 8, 2020, 5:57 p.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/metaseqr.query.R
Description
Returns an SQLIte table template defintion, according to UCSC Genome Browser database table schemas. This functionality is used when the package RMySQL is not available for some reason, e.g. Windows machines. Internal use only.
Usage
1 | get.ucsc.tbl.tpl(tab, what="queries")
|
Arguments
tab |
name of UCSC database table. |
what |
|
Value
An SQLite table definition.
Author(s)
Panagiotis Moulos
Examples
1 | db.table.tmpl <- get.ucsc.tbl.tpl("knownCanonical")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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