hg19.exon.counts: Human RNA-Seq data with three conditions, three samples

In metaseqR: An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms.

Description

This data set contains RNA-Seq exon read counts for 3 chromosomes. The data are from an experiment studying the effect of a long non-coding RNA related to the ASCL2 gene in WNT signaling and intestinal cancer. It has two conditions (CON, DOX) and four samples (CON_BR1, CON_BR2, DOX_BR1, DOX_BR2). It also contains a predefined sample.list and libsize.list named sample.list.hg18 and libsize.list.hg18.

Format

a data.frame with exon read counts and some embedded annotation, one row per exon.

Author(s)

Panagiotis Moulos

Source

GEO (http://www.ncbi.nlm.nih.gov/geo/)

metaseqR documentation built on Nov. 8, 2020, 5:57 p.m.