methylGSA: Gene Set Analysis Using the Outcome of Differential Methylation

The main functions for methylGSA are methylglm and methylRRA. methylGSA implements logistic regression adjusting number of probes as a covariate. methylRRA adjusts multiple p-values of each gene by Robust Rank Aggregation. For more detailed help information, please see the vignette.

Package details

AuthorXu Ren [aut, cre], Pei Fen Kuan [aut]
Bioconductor views DNAMethylation DifferentialMethylation GeneRegulation GeneSetEnrichment Pathways Regression
MaintainerXu Ren <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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methylGSA documentation built on Nov. 8, 2020, 8:29 p.m.