methylGSA: Gene Set Analysis Using the Outcome of Differential Methylation

The main functions for methylGSA are methylglm and methylRRA. methylGSA implements logistic regression adjusting number of probes as a covariate. methylRRA adjusts multiple p-values of each gene by Robust Rank Aggregation. For more detailed help information, please see the vignette.

Package details

AuthorXu Ren [aut, cre], Pei Fen Kuan [aut]
Bioconductor views DNAMethylation DifferentialMethylation GeneRegulation GeneSetEnrichment Pathways Regression
MaintainerXu Ren <[email protected]>
Package repositoryView on Bioconductor
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methylGSA documentation built on March 4, 2019, 2 a.m.