runExample: methylGSA shiny app
In methylGSA: Gene Set Analysis Using the Outcome of Differential Methylation
Description
Usage
Arguments
Value
Note
Examples
Description
This is an interface for Bioconductor package methylGSA.
Usage
1
runExample(run = TRUE)
Arguments
run
Run the app or not. Default is TRUE
Value
The shiny app will be opened in a web browser.
Note
In order to run the app, the following R/Bioconductor packages needs
to be installed properly: shinycssloaders, DT, ggplot2,
IlluminaHumanMethylation450kanno.ilmn12.hg19 (if analyzing 450K array)
IlluminaHumanMethylationEPICanno.ilm10b4.hg19 (if analyzing EPIC array)
Examples
1
2
3
4
## Please note: in this example, the argument run is set to be FALSE in
## order to pass R CMD check. However, when using the app, users are
## expected to launch the app by runExample()
runExample(FALSE)
methylGSA documentation built on Nov. 8, 2020, 8:29 p.m.
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Description Usage Arguments Value Note Examples
Description
This is an interface for Bioconductor package methylGSA.
Usage
1 | runExample(run = TRUE)
|
Arguments
run |
Run the app or not. Default is TRUE |
Value
The shiny app will be opened in a web browser.
Note
In order to run the app, the following R/Bioconductor packages needs to be installed properly: shinycssloaders, DT, ggplot2, IlluminaHumanMethylation450kanno.ilmn12.hg19 (if analyzing 450K array) IlluminaHumanMethylationEPICanno.ilm10b4.hg19 (if analyzing EPIC array)
Examples
1 2 3 4 | ## Please note: in this example, the argument run is set to be FALSE in
## order to pass R CMD check. However, when using the app, users are
## expected to launch the app by runExample()
runExample(FALSE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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