Returns summary statistics of an mfa fit, including MAP pseudotime and branch allocations along with uncertainties.
An MFA fit returned by a call to
data_frame with the following columns:
pseudotime The MAP pseudotime estimate
branch The MAP branch estimate
branch_certainty The proportion of traces for which the cell
is assigned to its MAP branch
pseudotime_lower The lower bound on the 95
(HPD) credible interval
pseudotime_upper The upper bound on the 95
1 2 3
Sampling for 20 cells and 5 genes Warning messages: 1: `as_data_frame()` is deprecated as of tibble 2.0.0. Please use `as_tibble()` instead. The signature and semantics have changed, see `?as_tibble`. This warning is displayed once every 8 hours. Call `lifecycle::last_warnings()` to see where this warning was generated. 2: The `x` argument of `as_tibble.matrix()` must have unique column names if `.name_repair` is omitted as of tibble 2.0.0. Using compatibility `.name_repair`. This warning is displayed once every 8 hours. Call `lifecycle::last_warnings()` to see where this warning was generated.
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