miRNA_AccessionToName: miRBase Accession to miRNA Name in specified version

Description Usage Arguments Value Author(s) Examples

View source: R/miRBaseConvert.R

Description

This function converts a group of any species' miRNA Accessions (including precursor and mature miRNA) to a specified miRBase version if the Accessions have been defined in miRBase.

Usage

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miRNA_AccessionToName(Accessions, targetVersion = "v22")

Arguments

Accessions

A character vector representing the miRNA Accessions needed to be convert.

targetVersion

A character value representing the target miRBase version corresponding the Accessions. The optional values are in below:
"v6","v7_1","v8","v8_1","v8_2","v9","v9_1",
"v9_2","v10","v10_1","v11","v12","v13","v14",
"v15","v16","v17","v18","v19","v20","v21","v22"

Value

A nx2 data frame. The number of rows equal to the input miRNA names. The two columns are defined as below:

Author(s)

Xu, Taosheng taosheng.x@gmail.com

Examples

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data(miRNATest)
Accessions=miRNATest$Accession
result1=miRNA_AccessionToName(Accessions,targetVersion="v13")
result2=miRNA_AccessionToName(Accessions,targetVersion="v22")

miRBaseConverter documentation built on Nov. 8, 2020, 11:08 p.m.