miRNAmeConverter: Convert miRNA Names to Different miRBase Versions

Package containing an S4 class for translating mature miRNA names to different miRBase versions, sequence retrieval, checking names for validity and detecting miRBase version of a given set of names (data from http://www.mirbase.org/).

AuthorStefan Haunsberger [aut, cre]
Date of publicationNone
MaintainerStefan J. Haunsberger <stefan.haunsberger@gmail.com>
LicenseArtistic-2.0
Version1.2.0

View on Bioconductor

Files in this package

miRNAmeConverter/DESCRIPTION
miRNAmeConverter/NAMESPACE
miRNAmeConverter/R
miRNAmeConverter/R/MiRNANameConverter.R miRNAmeConverter/R/data.R miRNAmeConverter/R/getters.R miRNAmeConverter/R/printFunctionEntryInformation.R miRNAmeConverter/R/printFunctionExitInformation.R miRNAmeConverter/R/setters.R
miRNAmeConverter/build
miRNAmeConverter/build/vignette.rds
miRNAmeConverter/data
miRNAmeConverter/data/example-miRNAs.rdata
miRNAmeConverter/inst
miRNAmeConverter/inst/CITATION
miRNAmeConverter/inst/NEWS
miRNAmeConverter/inst/doc
miRNAmeConverter/inst/doc/miRNAmeConverter-vignette.R
miRNAmeConverter/inst/doc/miRNAmeConverter-vignette.Rmd
miRNAmeConverter/inst/doc/miRNAmeConverter-vignette.pdf
miRNAmeConverter/man
miRNAmeConverter/man/MiRNANameConverter-ANY-method.Rd miRNAmeConverter/man/MiRNANameConverter.Rd miRNAmeConverter/man/assessMiRNASwappingMIMAT.Rd miRNAmeConverter/man/assessVersion.Rd miRNAmeConverter/man/checkMiRNAName.Rd miRNAmeConverter/man/currentVersion-set.Rd miRNAmeConverter/man/currentVersion.Rd miRNAmeConverter/man/example.miRNAs.Rd miRNAmeConverter/man/miRNAmeConverter.Rd miRNAmeConverter/man/nOrganisms-set.Rd miRNAmeConverter/man/nOrganisms.Rd miRNAmeConverter/man/nTotalEntries-set.Rd miRNAmeConverter/man/nTotalEntries.Rd miRNAmeConverter/man/saveResults.Rd miRNAmeConverter/man/show-MiRNANameConverter-method.Rd miRNAmeConverter/man/translateMiRNAName.Rd miRNAmeConverter/man/validOrganisms-set.Rd miRNAmeConverter/man/validOrganisms.Rd miRNAmeConverter/man/validVersions-set.Rd miRNAmeConverter/man/validVersions.Rd
miRNAmeConverter/tests
miRNAmeConverter/tests/testthat
miRNAmeConverter/tests/testthat.R
miRNAmeConverter/tests/testthat/names.txt
miRNAmeConverter/tests/testthat/test-assessMiRNASwappingMIMAT.R
miRNAmeConverter/tests/testthat/test-assessVersion.R
miRNAmeConverter/tests/testthat/test-checkMiRNAName.R
miRNAmeConverter/tests/testthat/test-checkMiRNANameConverter.R
miRNAmeConverter/tests/testthat/test-translateMiRNAName.R
miRNAmeConverter/vignettes
miRNAmeConverter/vignettes/apa.csl
miRNAmeConverter/vignettes/class-diagram.png
miRNAmeConverter/vignettes/miRNAmeConverter-vignette.Rmd
miRNAmeConverter/vignettes/references.bib

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.