translate: Homology transfer for miRNAtap

In miRNAtap: miRNAtap: microRNA Targets - Aggregated Predictions

Description

This function maps gene entrez ID between species using homology information from Homologene.

Usage

translate(entrezes, from = "mmu", to = "rno", ...)

Arguments

entrezes	data.frame with entrez Gene IDs and their scores
from	origin species, default 'mmu', Mus musculus
to	target species, default
...	any optional arguments

Value

data.frame object with orthologous genes' entrez IDs and corresponding scores

Author(s)

Maciej Pajak [e-mail]

Examples

mouse_genes <- data.frame(GeneID = 
        c("15364", "56520", "57781", "58180", "18035", "239857"))
translate(mouse_genes, from='mmu', to='rno')

miRNAtap documentation built on Nov. 8, 2020, 8:12 p.m.