Files in motifbreakR

A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites

README.md

NAMESPACE

DESCRIPTION

motifbreakR.Rproj

build/vignette.rds

data/motifbreakR_motif.rda

data/hocomoco.rda

data/datalist

data/factorbook.rda

data/example.pvalue.rda

data/homer.rda

data/example.results.rda

data/encodemotif.rda

R/scoreMotif.R R/locus.from.rsid.R R/data.R

vignettes/motifbreakr_plot.png

vignettes/motifbreakR-vignette.Rmd

vignettes/motifbreakr-manuscript.png

man/snps.from.file.Rd man/calculatePvalue.Rd man/scoreAllWindows.Rd man/homer.Rd man/motifbreakR_motif.Rd man/example.results.Rd man/hocomoco.Rd man/snps.from.rsid.Rd man/plotMB.Rd man/motifbreakR.Rd man/factorbook.Rd man/encodemotif.Rd

inst/example.pvalue.rda

inst/CITATION

inst/doc/motifbreakR-vignette.R inst/doc/motifbreakR-vignette.Rmd

inst/doc/motifbreakR-vignette.html

inst/extdata/danRer.bed

inst/extdata/pca.enhancer.snps.rda

inst/extdata/example.snpfrombed.rda

inst/extdata/chek2.vcf.gz

inst/extdata/pca.enhancer.snps

inst/extdata/example.pvalue.rda

inst/extdata/chek2.vcf.gz.tbi

inst/extdata/snps.bed

motifbreakR documentation built on Nov. 8, 2020, 5:31 p.m.