msmsEDA: Exploratory Data Analysis of LC-MS/MS data by spectral counts

Exploratory data analysis to assess the quality of a set of LC-MS/MS experiments, and visualize de influence of the involved factors.

AuthorJosep Gregori, Alex Sanchez, and Josep Villanueva
Date of publicationNone
MaintainerJosep Gregori <josep.gregori@gmail.com>
LicenseGPL-2
Version1.12.0

View on Bioconductor

Files

msmsEDA/DESCRIPTION
msmsEDA/NAMESPACE
msmsEDA/R
msmsEDA/R/EDA_functions.R
msmsEDA/build
msmsEDA/build/vignette.rds
msmsEDA/data
msmsEDA/data/msms.dataset.rda
msmsEDA/data/pnms.rda
msmsEDA/inst
msmsEDA/inst/doc
msmsEDA/inst/doc/msmsData-Vignette.R
msmsEDA/inst/doc/msmsData-Vignette.Rnw
msmsEDA/inst/doc/msmsData-Vignette.pdf
msmsEDA/man
msmsEDA/man/batch.neutralize.Rd msmsEDA/man/count.stats.Rd msmsEDA/man/counts.hc.Rd msmsEDA/man/counts.heatmap.Rd msmsEDA/man/counts.pca.Rd msmsEDA/man/disp.estimates.Rd msmsEDA/man/filter.flags.Rd msmsEDA/man/gene.table.Rd msmsEDA/man/msms.dataset.Rd msmsEDA/man/msmsEDA-package.Rd msmsEDA/man/norm.counts.Rd msmsEDA/man/pnms.Rd msmsEDA/man/pp.msms.data.Rd msmsEDA/man/spc.barplots.Rd msmsEDA/man/spc.boxplots.Rd msmsEDA/man/spc.densityplots.Rd msmsEDA/man/spc.scatterplot.Rd
msmsEDA/vignettes
msmsEDA/vignettes/msmsData-Vignette.Rnw

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