API for multicrispr
Multi-locus multi-purpose Crispr/Cas design
| Global functions | |
|---|---|
| add_context | Source code |
| add_genome_matches | Man page Source code |
| add_genome_matches_bowtie | Source code |
| add_genome_matches_pdict | Source code |
| add_inverse_strand | Man page Source code |
| add_nickspacers | Source code |
| add_seq | Man page Source code |
| add_target_matches | Man page Source code |
| annotate_granges | Source code |
| bed_to_granges | Man page Source code |
| cduplicated | Source code |
| cextract1 | Source code |
| cextract2 | Source code |
| char_to_granges | Man page Source code |
| cmessage | Source code |
| copy | Source code |
| count_spacer_matches | Source code |
| csign | Source code |
| default_alpha_var | Source code |
| doench2014 | Source code |
| doench2016 | Source code |
| double_flank | Man page Source code |
| down_flank | Man page Source code |
| dt2gr | Man page Source code |
| error | Source code |
| expand_iupac_ambiguities | Source code |
| explode | Source code |
| extend | Man page Source code |
| extend_for_pe | Man page Source code |
| extend_pe_to_gg | Man page Source code |
| extract_matchranges | Man page Source code |
| extract_subranges | Man page Source code |
| find_gg | Man page Source code |
| find_primespacers | Man page |
| find_spacers | Man page Source code |
| genefile_to_granges | Man page Source code |
| genes_to_granges | Man page Source code |
| get_plus_seq | Source code |
| gr2dt | Man page Source code |
| has_been_indexed | Man page |
| index_genome | Man page |
| index_targets | Man page |
| make_unique_names | Source code |
| name_uniquely | Source code |
| num2scalarstr | Source code |
| paste_dtcols | Source code |
| pdict_count | Source code |
| pdict_count_bsgenome | Source code |
| plot_intervals | Man page |
| plot_karyogram | Man page Source code |
| read_ranges | Man page Source code |
| revcomp | Source code |
| score_ontargets | Man page Source code |
| summarize_loci | Source code |
| uniquify | Source code |
| up_flank | Man page Source code |
| vextract1 | Source code |
| vextract2 | Source code |
| write_ranges | Man page Source code |
