Files in multicrispr

Multi-locus multi-purpose Crispr/Cas design

README.md

NEWS

NAMESPACE

DESCRIPTION

build/vignette.rds

R/05_manipulate_ranges.R R/02_utilities.R R/07_count_offtargets.R R/04_bed_to_granges.R R/00_imports.R R/09_write_ranges.R R/06_find_spacers.R R/08_score_ontargets.R R/06_find_primespacers.R R/03_plot.R vignettes/genome_arithmetics.Rmd vignettes/crispr_grna_design.Rmd vignettes/prime_editing.Rmd man/add_target_matches.Rd man/plot_intervals.Rd man/add_inverse_strand.Rd man/index_targets.Rd man/bed_to_granges.Rd man/plot_karyogram.Rd man/find_primespacers.Rd man/up_flank.Rd man/extend_for_pe.Rd man/has_been_indexed.Rd man/double_flank.Rd man/extend_pe_to_gg.Rd man/genes_to_granges.Rd man/extract_subranges.Rd man/find_gg.Rd man/write_ranges.Rd man/find_spacers.Rd man/add_seq.Rd man/add_genome_matches.Rd man/extract_matchranges.Rd man/index_genome.Rd man/score_ontargets.Rd man/char_to_granges.Rd man/gr2dt.Rd tests/testthat.R tests/testthat/test_flank.R tests/testthat/test_extend.R tests/testthat/test_read.R

inst/CITATION

inst/doc/genome_arithmetics.R inst/doc/genome_arithmetics.Rmd inst/doc/crispr_grna_design.R

inst/doc/crispr_grna_design.html

inst/doc/prime_editing.html

inst/doc/genome_arithmetics.html

inst/doc/crispr_grna_design.Rmd inst/doc/prime_editing.R inst/doc/prime_editing.Rmd

inst/extdata/overview.png

inst/extdata/path2256.png

inst/extdata/readme_portrait.pptx

inst/extdata/SRF.entrez

inst/extdata/pe.svg

inst/extdata/05_efficiency.png

inst/extdata/SRF.bed

inst/extdata/04_offtargets.png

inst/extdata/crispr.png

inst/extdata/02_transform.png

inst/extdata/SRF.ensembl

inst/extdata/pe.png

inst/extdata/readme_portrait.png

inst/extdata/crispr.svg

inst/extdata/01_define_targets.png

inst/extdata/03_find.png

inst/scipts/01_annotationhub_resources.R inst/scipts/07_validate_brunello.R inst/scipts/10_compare_offtargetanalysis.R inst/scipts/02_pe_coords_hexa.R inst/scipts/02_pe_coords_prnp.R inst/scipts/04_use_cases.R inst/scipts/08_genome_arithmetics_figure.R inst/scipts/00_filter_offtargetfree_sites.R inst/scipts/02_pe_coords_hbb.R inst/scipts/05_pipeline_for_becnhmarking.R inst/scipts/06_validate_pe.R inst/scipts/02_pe_clinvar.R inst/scipts/02_pe_coords_cftr.R inst/scipts/09_readme_fig.R inst/scipts/03_save_srf_genes.R inst/scipts/06_validate_paralleltargeting.R

multicrispr documentation built on Nov. 8, 2020, 5:10 p.m.