contabs | Contingency tables for networks with probabilistic edges. |
contabs.netwBMA | Network assessment with incomplete context. |
contabs.prelim | Preliminary calculation for network assessment. |
dream4 | DREAM 4 (Stolovitsky et al. 2007) 'gold standard' reference... |
fastBMAcontrol | Control parameters for 'networkBMA' when using fastBMA... |
fastgControl | Control parameters for using Zellner's g-prior in fastBMA... |
gControl | Control parameters for using Zellner's g-prior in 'ScanBMA' |
iBMAcontrolLM | Control parameters for 'iterateBMAlm' |
iterateBMAlm | Iterative BMA for linear modeling with prior variable... |
networkBMA | Gene network inference from time series data via BMA. |
networkBMA-internal | Internal functions for the networkBMA package |
roc | Receiver Operating Characteristic and Precision-Recall Curves |
ScanBMA | Bayesian Model Averaging for linear regression models. |
ScanBMAcontrol | Control parameters for 'ScanBMA' |
scores | Scores for assessment from contingency tables. |
summary.networkBMA | Summarizes a 'networkBMA' object. |
varord | Variable orderings for linear regression. |
vignette | The subsets of the yeast-rapamycin time-series data from... |
writeEdges | Output network edges to text in Cytoscape-readable format. |
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