fqcVersion: Get the FASTQC version

In ngsReports: Load FastqQC reports and other NGS related files

Description

Get the FASTQC version used to generate the intial files

Usage

## S4 method for signature 'FastqcData'
fqcVersion(object)

## S4 method for signature 'FastqcDataList'
fqcVersion(object)

## S4 method for signature 'ANY'
fqcVersion(object)

Arguments

object

An object of class FastqcData or FastqcDataList

Value

A character vector (FastqcData), or tibble (FastqcDataList)

Examples

# Get the files included with the package
packageDir <- system.file("extdata", package = "ngsReports")
fl <- list.files(packageDir, pattern = "fastqc.zip", full.names = TRUE)

# Load the FASTQC data as a FastqcDataList object
fdl <- FastqcDataList(fl)

# Get the FASTQC version
fqcVersion(fdl)

ngsReports documentation built on Nov. 23, 2020, 2:01 a.m.