gcAvail: List Genomes or Transcriptomes with Theoretical GC Content

In ngsReports: Load FastqQC reports and other NGS related files

Description

List available genomes or transcriptomes in a TheoreticalGC object

Usage

gcAvail(object, type)

## S4 method for signature 'TheoreticalGC'
gcAvail(object, type)

Arguments

object	An object of class TheoreticalGC
type	character indicating either Genome or Transcriptome

Details

An object of class TheoreticalGC can hold the theoretical GC content for one or more species, for either the genome or transriptome. This function checks which species are available in the given object, for either the genome or transcriptome, as supplied to the parameter type.

Value

A tibble object

Examples

gcAvail(gcTheoretical, "Genome")

ngsReports documentation built on Nov. 23, 2020, 2:01 a.m.