Nothing
inst/unitTests/gen_rma_t0.R
In oligo: Preprocessing tools for oligonucleotide arrays
library(oligo)
xysPath <- system.file("extdata", package="maqcExpression4plex")
xysFiles <- list.xysfiles(xysPath, full.name=TRUE)
ngsExpressionFeatureSet <- read.xysfiles(xysFiles)
summarized <- rma(ngsExpressionFeatureSet)
rm(ngsExpressionFeatureSet)
set.seed(1)
i0 <- sample(nrow(summarized), 1000)
save(i0, file='i0.rda')
rma_ref0 <- exprs(summarized)[i0,]
save(rma_ref0, file='rma_ref0.rda')
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oligo documentation built on Nov. 8, 2020, 6:52 p.m.
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library(oligo)
xysPath <- system.file("extdata", package="maqcExpression4plex")
xysFiles <- list.xysfiles(xysPath, full.name=TRUE)
ngsExpressionFeatureSet <- read.xysfiles(xysFiles)
summarized <- rma(ngsExpressionFeatureSet)
rm(ngsExpressionFeatureSet)
set.seed(1)
i0 <- sample(nrow(summarized), 1000)
save(i0, file='i0.rda')
rma_ref0 <- exprs(summarized)[i0,]
save(rma_ref0, file='rma_ref0.rda')
Try the oligo package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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