API for padma
Individualized Multi-Omic Pathway Deviation Scores Using Multiple Factor Analysis
| Global functions | |
|---|---|
| LUAD_subset | Man page |
| MFA_results | Man page |
| MFA_results,padmaResults-method | Man page |
| factorMap | Man page Source code |
| imputed_genes | Man page |
| imputed_genes,padmaResults-method | Man page |
| mirtarbase | Man page |
| msigdb | Man page |
| ngenes | Man page |
| ngenes,padmaResults-method | Man page |
| omicsContrib | Man page Source code |
| padma | Man page |
| padma,MultiAssayExperiment-method | Man page |
| padma,list-method | Man page |
| padma-methods | Man page |
| padmaResults | Man page Source code |
| padmaResults-class | Man page |
| padmaRun | Man page Source code |
| pathway_gene_deviation | Man page |
| pathway_gene_deviation,padmaResults-method | Man page |
| pathway_gene_deviation-method | Man page |
| pathway_name | Man page |
| pathway_name,padmaResults-method | Man page |
| pathway_scores | Source code |
| removed_genes | Man page |
| removed_genes,padmaResults-method | Man page |
| show | Man page |
| show,padmaResults-method | Man page |
| summary | Man page |
| summary,padmaResults-method | Man page |
| summary-methods | Man page |
| switch_names | Source code |
| whichminpositivevar | Source code |
