Man pages for padma
Individualized Multi-Omic Pathway Deviation Scores Using Multiple Factor Analysis
| factorMap | Plot an MFA factor map for individuals or partial factor map... |
| LUAD_subset | Subset of batch-corrected multi-omic TCGA data in lung... |
| mirtarbase | Curated miR-target interaction predictions from miRTarBase |
| msigdb | MSigDB canonical pathways and corresponding gene lists |
| omicsContrib | Plot the omics contribution per MFA axis and the overall... |
| padma | Calculate individualized deviation scores from multi-omic... |
| padmaHelpers | Accessors for a padmaResults object. |
| padmaResults | padmaResults object and constructor |
| padmaRun | Calculate individualized deviation scores from multi-omic... |
| summary | Summarize results from padma |
