Plot graph

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Description

plotGraph plots a bipartite graph

Usage

1

Arguments

x

an object of class "panda"

Value

An matrix describing the subsetted bipartite network.

Examples

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data(pandaToyData)
pandaRes <- panda(pandaToyData$motif,
           pandaToyData$expression,pandaToyData$ppi,hamming=.001,progress=TRUE)
topPandaRes <- topedges(pandaRes,1000)
subnet.pandaRes <- subnetwork(topPandaRes,c("AR","ARID3A","ELK1"))
plotGraph(subnet.pandaRes)

data(pandaResult)
topPandaRes <- topedges(pandaResult, 1000)
subnet.pandaRes <- subnetwork(topPandaRes,c("AR","ARID3A","ELK1"))
plotGraph(subnet.pandaRes)