pathifier: Quantify deregulation of pathways in cancer

Pathifier is an algorithm that infers pathway deregulation scores for each tumor sample on the basis of expression data. This score is determined, in a context-specific manner, for every particular dataset and type of cancer that is being investigated. The algorithm transforms gene-level information into pathway-level information, generating a compact and biologically relevant representation of each sample.

Package details

AuthorYotam Drier
Bioconductor views Network
MaintainerAssif Yitzhaky <[email protected]>
Package repositoryView on Bioconductor
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pathifier documentation built on Oct. 31, 2019, 2:24 a.m.