pathifier: Quantify deregulation of pathways in cancer
Version 1.16.0

Pathifier is an algorithm that infers pathway deregulation scores for each tumor sample on the basis of expression data. This score is determined, in a context-specific manner, for every particular dataset and type of cancer that is being investigated. The algorithm transforms gene-level information into pathway-level information, generating a compact and biologically relevant representation of each sample.

Package details

AuthorYotam Drier
Bioconductor views Network
MaintainerAssif Yitzhaky <[email protected]>
LicenseArtistic-1.0
Version1.16.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("pathifier")

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pathifier documentation built on Nov. 17, 2017, 9:39 a.m.