pcot2: Principal Coordinates and Hotelling's T-Square method

PCOT2 is a permutation-based method for investigating changes in the activity of multi-gene networks. It utilizes inter-gene correlation information to detect significant alterations in gene network activities. Currently it can be applied to two-sample comparisons.

Getting started

Package details

AuthorSarah Song, Mik Black
Bioconductor views DifferentialExpression GeneExpression KEGG Microarray Network
MaintainerSarah Song <qson003@stat.auckland.ac.nz>
LicenseGPL (>= 2)
Version1.58.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("pcot2")

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pcot2 documentation built on Nov. 8, 2020, 5:08 p.m.