phenoDist: Phenotypic distance measures

PhenoDist is designed for measuring phenotypic distance in image-based high-throughput screening, in order to identify strong phenotypes and to group treatments into functional clusters.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("phenoDist")
AuthorXian Zhang, Gregoire Pau, Wolfgang Huber, Michael Boutros
Bioconductor views CellBasedAssays
Date of publicationNone
MaintainerXian Zhang <xianzhang@gmail.com>
LicenseLGPL-2.1
Version1.24.0
http://www.dkfz.de/signaling, http://www.embl.de/research/units/genome_biology/huber/

View on Bioconductor

Files

CHANGES
DESCRIPTION
NAMESPACE
R
R/PDMatrix.R R/clusterAnalysis.R R/phenotypeIdentification.R R/qualityControl.R R/tools.R
build
build/vignette.rds
inst
inst/CITATION
inst/doc
inst/doc/phenoDist.R
inst/doc/phenoDist.Rnw
inst/doc/phenoDist.pdf
inst/kimorph
inst/kimorph/kimorph.rda
inst/kimorph/selectedFtrs.rda
inst/kimorph/svmAccPDM_Pl1.rda
man
man/PDMByFactorAnalysis.Rd man/PDMByKS.Rd man/PDMBySvmAccuracy.Rd man/PDMBySvmWeightVector.Rd man/PDMByWellAvg.Rd man/clusterDist.Rd man/ctlSeparatn.Rd man/distToNeg.Rd man/enrichAnalysis.Rd man/repCorr.Rd man/repDistRank.Rd
vignettes
vignettes/phenoDist.Rnw
vignettes/phenoDist.bib
Spark Online Training by Edureka

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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