phenoDist: Phenotypic distance measures

PhenoDist is designed for measuring phenotypic distance in image-based high-throughput screening, in order to identify strong phenotypes and to group treatments into functional clusters.

AuthorXian Zhang, Gregoire Pau, Wolfgang Huber, Michael Boutros
Date of publicationNone
MaintainerXian Zhang <xianzhang@gmail.com>
LicenseLGPL-2.1
Version1.22.0
http://www.dkfz.de/signaling, http://www.embl.de/research/units/genome_biology/huber/

View on Bioconductor

Files

phenoDist/CHANGES
phenoDist/DESCRIPTION
phenoDist/NAMESPACE
phenoDist/R
phenoDist/R/PDMatrix.R phenoDist/R/clusterAnalysis.R phenoDist/R/phenotypeIdentification.R phenoDist/R/qualityControl.R phenoDist/R/tools.R
phenoDist/build
phenoDist/build/vignette.rds
phenoDist/inst
phenoDist/inst/CITATION
phenoDist/inst/doc
phenoDist/inst/doc/phenoDist.R
phenoDist/inst/doc/phenoDist.Rnw
phenoDist/inst/doc/phenoDist.pdf
phenoDist/inst/kimorph
phenoDist/inst/kimorph/kimorph.rda
phenoDist/inst/kimorph/selectedFtrs.rda
phenoDist/inst/kimorph/svmAccPDM_Pl1.rda
phenoDist/man
phenoDist/man/PDMByFactorAnalysis.Rd phenoDist/man/PDMByKS.Rd phenoDist/man/PDMBySvmAccuracy.Rd phenoDist/man/PDMBySvmWeightVector.Rd phenoDist/man/PDMByWellAvg.Rd phenoDist/man/clusterDist.Rd phenoDist/man/ctlSeparatn.Rd phenoDist/man/distToNeg.Rd phenoDist/man/enrichAnalysis.Rd phenoDist/man/repCorr.Rd phenoDist/man/repDistRank.Rd
phenoDist/vignettes
phenoDist/vignettes/phenoDist.Rnw
phenoDist/vignettes/phenoDist.bib

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.