Files in podkat

Position-Dependent Kernel Association Test

README.md R/weights-methods.R R/filterResult-methods.R R/c-methods.R R/split-methods.R R/nullModel-methods.R R/readVariantInfo-methods.R R/show-methods.R R/readGenotypeMatrix-methods.R R/AllGenerics.R R/unmaskedRegions.R R/inputChecks.R R/sort-methods.R R/qqplot-methods.R R/partitionRegions-methods.R R/computePvalues.R R/readRegionsFromBedFile.R R/resampling.R R/computeKernel.R R/genotypeMatrix-methods.R R/summary-methods.R R/p.adjust-methods.R R/plot-methods.R R/AllClasses.R R/weightFuncs.R R/coerce-methods.R R/access-methods.R R/print-methods.R R/computeWeights.R R/assocTest-methods.R R/readSampleNamesFromVcfHeader.R vignettes/logisticWeights.pdf vignettes/invSdWeights.pdf vignettes/SKAT_example.pdf vignettes/betaWeights.pdf vignettes/PODKAT_workflow.pdf vignettes/PODKAT_example.pdf vignettes/PosKernel.pdf vignettes/JKU_EN_noName.pdf man/unmasked-datasets.Rd man/sort-methods.Rd man/readVariantInfo-methods.Rd man/readGenotypeMatrix-methods.Rd man/p.adjust-methods.Rd man/AssocTestResultRanges-class.Rd man/readRegionsFromBedFile.Rd man/partitionRegions-methods.Rd man/NullModel-class.Rd man/split-methods.Rd man/AssocTestResult-class.Rd man/filterResult-methods.Rd man/genotypeMatrix-methods.Rd man/GenotypeMatrix-class.Rd man/podkat-package.Rd man/readSampleNamesFromVcfHeader.Rd man/assocTest-methods.Rd man/computeKernel.Rd man/nullModel-methods.Rd man/unmaskedRegions.Rd man/print-methods.Rd man/weights-methods.Rd man/qqplot-methods.Rd man/plot-methods.Rd man/hgA.Rd man/VariantInfo-class.Rd man/weightFuncs.Rd inst/doc/podkat.pdf inst/doc/podkat.R