R/arrowhead_gm12878_5kb.R

In preciseTAD: preciseTAD: A machine learning framework for precise TAD boundary prediction

#' Domain data from ARROWHEAD TAD-caller for GM12878 at 5 kb
#'
#' A data frame with 3 columns and 8409 rows
#' \describe{
#' \item{V1}{The chromosome number}
#' \item{V2}{The start coordinate of the TAD}
#' \item{V3}{The end coordinate of the TAD}
#' }
#'
#' @source Data from Rao SS, Huntley MH, Durand NC, Stamenova EK et al.
#' A 3D map of the human genome at kilobase resolution reveals principles
#' of chromatin looping. Cell 2014 Dec 18;159(7):1665-80. PMID: 25497547.
#' Available at
#' \url{https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE63525}
#' @return A data.frame
#'
"arrowhead_gm12878_5kb"